The modernization of rural governance is not only the basis of taking the Chinese path to modernization, but also the dynamic evolution and continuous prominence in the new era context of rural revitalization strategy and urban -rural integration development. In the process of social mobility, key issues such as the unbalanced allocation of urban and rural factors, disintegration of rural social communities, and fragmentation of governance mechanisms need to be addressed. Promoting innovation in rural social governance in the new development stage and implementing the rural revitalization strategy can not only restore the public ecological value of rural society, but also improve the unbalanced and inadequate development between urban and rural areas. In the new era, rural governance innovation should promote overall coordinated governance, achieve the “embedded integration” of village-level governance paradigms, break through the fragmented governance mechanisms; encourage dynamic balanced development, improve the “interconnected development” mechanism of urban-rural factor interaction, activate the endogenous driving forces for high-quality urban-rural integration development; enhance awareness of ideological values, strengthen village-level autonomy through “public empowerment”, safeguard the diverse supply of collective interests of villages, and ensure the comprehensive advancement of the rural revitalization strategy on the Chinese path to modernization.